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COL2A1

Gene
Official SymbolCOL2A1
Official Namecollagen type II alpha 1 chain
BirdBase IDBB-GG2309
CGNC ID49161
also known ascollagen alpha-1(II) chain|alpha 1 type II procollagen|alpha 1 type IIA collagen|alpha-1 type II collagen|collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital)|procollagen alpha 1(II)|type II collagen
gene typeprotein-coding
Genomic Map
Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
GenomicGenbank
RNANM_204426
PolypeptideNP_989757
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
UnigeneGga.2839
Microarray
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Zebrafish562496, 503730ENSDARG00000069093, ENSDARG00000011407ZDB-GENE-980526-192, ZDB-GENE-050302-9ZFIN:ZDB-GENE-980526-192, ZFIN:ZDB-GENE-050302-9
Xenopus394828, 397738, 3977396258352
Mouse12824ENSMUSG00000022483All phenotypic alleles (8):Spontaneous(1) Chemically induced(1) Radiation induced(1) Targeted, knock-out(2) Targeted, other(3) MGI:88452
Human1280ENSG00000139219MIM:200610MIM:120140
Gene Ontology
Molecular Functionextracellular matrix structural constituent, identical protein binding, metal ion binding, platelet-derived growth factor binding
Biological Processcartilage condensation, cartilage development involved in endochondral bone morphogenesis, cellular response to BMP stimulus, central nervous system development, chondrocyte differentiation, collagen fibril organization, embryonic skeletal joint morphogenesis, endochondral ossification, heart morphogenesis, inner ear morphogenesis, limb bud formation, negative regulation of extrinsic apoptotic signaling pathway in absence of ligand, notochord development, otic vesicle development, palate development, proteoglycan metabolic process, regulation of gene expression, sensory perception of sound, tissue homeostasis, visual perception
Cellular Componentbasement membrane, collagen type II, cytoplasm, extracellular space
Literature
eGIFT Analysis
Links to other databases
Entrez Gene395069
Ensembl Gene
KEGGgga:395069