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LHX1

Gene
Official SymbolLHX1
Official NameLIM homeobox 1
BirdBase IDBB-GG5477
CGNC ID4028
also known asLIM-1, LIM/homeobox protein Lhx1|LIM homeobox protein 1|domesticus (clone 2.3 kB) lim-1|homeobox protein Lim-1, Lim-1, Homeobox protein LIM-1
gene typeprotein-coding
Genomic Map
Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
GenomicGenbank
RNANM_205413
PolypeptideNP_990744
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
UnigeneGga.789
Microarray
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Zebrafish30463, 30454ENSDARG00000014018, ENSDARG00000007944ZDB-GENE-980526-347, ZDB-GENE-980526-116ZFIN:ZDB-GENE-980526-347, ZFIN:ZDB-GENE-980526-116
Xenopus100101708, 399323482481
Mouse16869All phenotypic alleles (8):Targeted, knock-out(1) Targeted, other(7) MGI:99783
Human3975ENSG00000273706MIM:601999
Gene Ontology
Molecular Functionnucleic acid binding transcription factor activity, sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, transcription corepressor activity, zinc ion binding
Biological Processanatomical structure formation involved in morphogenesis, anatomical structure morphogenesis, anterior/posterior axis specification, anterior/posterior pattern specification, branching involved in ureteric bud morphogenesis, cell-cell signaling, cerebellar Purkinje cell differentiation, cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation, cerebellum development, cervix development, comma-shaped body morphogenesis, dorsal/ventral pattern formation, ectoderm formation, embryonic pattern specification, embryonic retina morphogenesis in camera-type eye, embryonic viscerocranium morphogenesis, endoderm formation, epithelium development, forebrain regionalization, gastrulation with mouth forming second, head development, horizontal cell localization, kidney development, kidney morphogenesis, lateral motor column neuron migration, mesonephros development, metanephric renal vesicle morphogenesis, metanephric S-shaped body morphogenesis, motor neuron axon guidance, negative regulation of transcription, DNA-templated, nephric duct elongation, nephric duct formation, nephric duct morphogenesis, oviduct epithelium development, paramesonephric duct development, pattern specification process, positive regulation of anterior head development, positive regulation of branching involved in ureteric bud morphogenesis, positive regulation of embryonic development, positive regulation of gastrulation, positive regulation of nephron tubule epithelial cell differentiation, positive regulation of transcription, DNA-templated, post-embryonic development, primitive streak formation, pronephros development, regulation of gene expression, regulation of RNA biosynthetic process, renal vesicle morphogenesis, retina layer formation, somite rostral/caudal axis specification, spinal cord association neuron differentiation, spinal cord motor neuron differentiation, S-shaped body morphogenesis, telencephalon development, transcription from RNA polymerase II promoter, ureteric bud development, urogenital system development, uterine epithelium development, vagina development, ventral spinal cord development
Cellular Componentnucleus, protein complex
Literature
Links to other databases
Entrez Gene396381
Ensembl Gene
KEGGgga:396381